Archive | June 2016

GEDmatch tools 2016

Recently I gave an updated talk about GEDmatch.com for my local DNA special interest group, DIG, here in San Diego. GEDmatch.com is a DNA geek’s playground, but many less computer inclined folk find it difficult at first.

My Favorite GEDmatch Tools

It is the only place for those who have tested at Ancestry DNA to compare their results to a possible relative, chromosome by chromosome. It also has many tools that are unique such as ancestry composition calculators with more recent breakdowns and more categories than the main companies. I covered those in detail in my original talk about GEDmatch tools. Those slides are at http://slides.com/kittycooper/gedmatch#/5

The new talk – http://slides.com/kittycooper/gedmatch-10#/ – covered uploading your data, how to manage your kits and mark a kit for research, and much detail on the one-to-many function as well as all my other favorite tools (starred in the image to the left).

There is a new 23andme upload which is nice and fast as it uses the API so you actually log into your account there rather than uploading a file.

It makes sense to upload all your kits when you have tested at more than one company but please mark all but one kit as research only, so DNA relatives are not confused by seeing so many versions of the same person.

 

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New at GENI – Descendant and Ancestor Lists

There is an exciting new feature at the collaborative world tree at GENI.com – compact descendant and ancestor reports. These have a number of modern style features. Every person in the list gets a nice summary box on mouse-over and is, of course, clickable to their profile. The number of generations displayed is easily changed with a slider above the report.

These reports are initiated from the Actions menu as shown below.

GENI action menu

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New Ancestry kit in from my Wold cousin

You know you have an obsessive personality when a cousin’s DNA results come in and you put off as many plans as you can for the next 3 days in order to explore them. At least I have some observations to report on the new Ancestry chip as well as more data for my study of the Wold family.

Wold line cousins Kitty, Ed, MM

Wold line cousins Kitty, Ed, MM

According to Ancestry, this new chip has dropped some less interesting SNPs and replaced them with medically relevant ones as well as ones more useful for determining ancestry composition. The details are at http://blogs.ancestry.com/techroots/customer-testing-begins-on-new-ancestrydna-chip/

GEDmatch only tokenized 455K of the 700K SNPs from that new chip. However when I imported the raw data into a spreadsheet I saw that there were 668,961 lines of data as opposed to the previous 701,495 (then subtract 20 for the header), so not that different a number. New is chromosome 26 which is for the mitochondrial DNA.

My Wold cousin MM is the cousin whose doorstep I arrived on, Ancestry kit in hand, because I really really wanted her results. Those of you who have been to my Triangulation talk or read the article here may have noticed that I had no other cousins tested who are descended from my great-grandmother’s brother Charlie, the one presumed to be Kristine’s great-great-grandad. MM’s test has rectified that although she is descended from a different wife of Charlie’s than Kristine.

Since MM is the half first cousin of Kristine’s grandfather, she and Kristine are half first cousins twice removed. Do they match at the expected level?

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Snippets from the SCGS Jamboree

Going to a conference about your passion can be a really fun experience. It is wonderful to finally meet people who you have been emailing with and discussing important issues with online. Another favorite for me is the exhibit hall with vendors showing off their new and old stuff.

I had a great time at the SCGS Jamboree this year. Since I came home early, I am watching a talk streamed live about organizing my work space as I write this! The live stream is really well done. A small live image of the person is on the left and their slide is shown, much larger, on the right. Plus you can chat with the other folk watching. The live stream is available free, thanks to Ancestry.com, until July 5 see http://genealogyjamboree.blogspot.com/2016/05/jamboree-2016-registration-now-open-for.html

Richard and Kalani at the ISOGG booth

Richard and Kalani at the ISOGG booth

In order to pace myself at a conference, I try to limit myself to attending two presentations a day and spend the rest of the time schmoozing in the exhibit hall.

Two people who I have communicated extensively with online are pictured on the left in front of the ISOGG table.

Kalani Mondoy blogs about Polynesian DNA, which is tricky because it is so endogamous. His mother was adopted so he turned to DNA to find her biological family. Richard Weiss is a search angel and adoptee who is involved with DNAadoption.com including the building of their relationship calculator. Each has now found their biological families and both are Mayflower descendants!

Read on for some of my favorite snippets from the conference.

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